Sample Sequences

Cedric Notredame, 2001

Purpose of the Exercises

Choose a sequence among the following, and characterize it using bioinformatics tools. Among other things, identify its domain structure, try to predict its putative functions and its putative structure. All the sequences are of similar complexity.

TIPS

List Of Ressources

Site

Content

PubMed Pubmed, Blast, Psi-Blast
Infobiogen SRS
ExPASy SwissProt, Prosite
E.B.I. SRS, Blast, ClustalW
EMBnet Prosite,Blast,ClustalW
PBIL Blast,ClustalW
123D+ Structural Analysis
DALI Structure Comparison
Joy Structural Annotation
Docking 1 Protein Docking
Docking 2 Protein Docking

List of Sample Sequences

FILES

z170908.seq
z160220.seq
z133402.seq
z130251.seq
z180019.seq
z907770.seq
z303501.seq
z301071.seq
z224310.seq
z129025.seq
z033340.seq
z010111.seq
z003344.seq
z000111.seq
z057129.seq
z103952.seq
z100251.seq
z099901.seq
z093091.seq
d122056.seq