T-COFFEE, Version_5.72(Fri Jun 6 17:32:56 WEST 2008)
Cedric Notredame
CPU TIME:1 sec.
SCORE=47
*
BAD AVG GOOD
*
14|1qq4A|gi|183 : 51
23|1qq4A|gi|744 : 52
1qq4A : 42
93|1svpA|gi|755 : 35
71|1svpA|gi|928 : 28
38|1qq4A|gi|231 : 51
9|1qq4A|gi|1561 : 0
1svpA : 48
9|1svpA|gi|4262 : 50
65|1svpA|gi|191 : 0
cons : 47
14|1qq4A|gi|183 1 -----------------------------------QEG------- 3
23|1qq4A|gi|744 1 -------------------------------FGELPPGFE-RQVA 13
1qq4A 1 ------------------------------ANIVGGIEYS-INNA 14
93|1svpA|gi|755 1 --------------------------------------------- 0
71|1svpA|gi|928 1 --------------------------------------------- 0
38|1qq4A|gi|231 1 --------------------------------------PQ-ERIN 6
9|1qq4A|gi|1561 1 QTPKSVPLGSGFIIEPNGLIVTNYHVIANVDKINIKLADN-TELS 44
1svpA 1 ----------------------------LKLEADRLFDVKNEDGD 17
9|1svpA|gi|4262 1 ---------------------------AMKLESDKTFPIR-LDGK 17
65|1svpA|gi|191 1 -----------------------------SVKRARQSTFPVYHDG 16
cons 1 45
14|1qq4A|gi|183 4 --LGSG-FIIN--ED-GYVVTNYHVINGAQEVKVIFSDGKEVNAK 42
23|1qq4A|gi|744 14 -SLGSG-FIFD--PE-GYILTNYHVVGGADNITVTMLDGSKYDAE 53
1qq4A 15 -SLCSVGFSVTRGAT-KGFVTAGHCGTVNATARI---GGAVV-GT 53
93|1svpA|gi|755 1 --------------------------------------------- 0
71|1svpA|gi|928 1 --------------------------------------------- 0
38|1qq4A|gi|231 7 ESLGSG-VIID--AKNGYVLTNHHVIEGADEVSVTLADGRTVKAD 48
9|1qq4A|gi|1561 45 -AKLIG-NDTK-----TDLALLKIDSE--------EPLPFVEFGD 74
1svpA 18 -VIGHA-LAME-----GKVMKPLHVKG--------TIDHPVLSKL 47
9|1svpA|gi|4262 18 -INGYA-CVVG-----GKLFRPLHVEG--------KIDNDILAAL 47
65|1svpA|gi|191 17 -AISGY-AVLI-----GSRVFKPAHVK--------GKFDHPELAD 46
cons 46 90
14|1qq4A|gi|183 43 VVNYDA-ERDIAVIKIT-DDVKMPG-I------AQLGDSSTVKAG 78
23|1qq4A|gi|744 54 YIGGDE-ELDIAVIKIKASDKKFPY-L-------EFGDSDKVKIG 89
1qq4A 54 FAARVFPGNDRAWVSLTSA-QTLLPRVANGSSFVTVRGSTEAAVG 97
93|1svpA|gi|755 1 --------------------------------------------- 0
71|1svpA|gi|928 1 --------------------------------------------- 0
38|1qq4A|gi|231 49 FIGSDP-DTDVALMRI--PAQNLSA-I-------SLADSDALRVG 82
9|1qq4A|gi|1561 75 SNDARV-GDWVIAIGNPF-GNLGGT-V-------TSGI--ISSKG 107
1svpA 48 KFTKSS-AYDMEFAQLPV-NMRSEA-F-------TYTS--EHPEG 80
9|1svpA|gi|4262 48 KTKKAS-KYDLEYADVPQ-SMRSDT-F-------KYTH--EKPRG 80
65|1svpA|gi|191 47 IKFQVA-EVMDLEAAAYP-KCMRDQ-A-------AEPA--TMMDG 79
cons 91 135
14|1qq4A|gi|183 79 EEVIAIGNPLGKEFSSTVTKGIVSSPNR------KMKTE--NGNV 115
23|1qq4A|gi|744 90 EWAIAIGNPLG--FQHTVTVGVVSATNR------RIPKPDGSGYY 126
1qq4A 98 AAVCHSGR------TTGYQCGTITAKNV------TANYA--EGAV 128
93|1svpA|gi|755 1 -----------------NVQTKPGIFKT------AH--------- 13
71|1svpA|gi|928 1 -----------------AVQTKPGLFKT------NT--------- 13
38|1qq4A|gi|231 83 DFVVAVGNPFG--IGQTVTSGIVSAVGRSGLRGLGY--------- 116
9|1qq4A|gi|1561 108 -RDIDI-----------DTDNIVDNF------------------- 121
1svpA 81 -FYNWH-----------HGAVQYSGG------------------- 94
9|1svpA|gi|4262 81 -YYSWH-----------HGAVQYENG------------------- 94
65|1svpA|gi|191 80 -VYNGE-----------YGNIQEWRT------------------- 93
cons 136 180
14|1qq4A|gi|183 116 LDYIQTDAAINPGNSGGPLINSKGEVIGINTAKKVG--------- 151
23|1qq4A|gi|744 127 VGLIQTDAAINPGNSGGPLLNIHGEVIGINTAI-VNP-------- 162
1qq4A 129 RGLTQSNACMGRGDSGGSWITSAGQAQGVMSGG-NVQSN---GNN 169
93|1svpA|gi|755 14 GEIGAVSLDYPIGTSGSPIVNSNGEIIGLY-GNG----------V 47
71|1svpA|gi|928 14 GTIGAVSLDFSPGTSGSPIVDKKGKVVGLY-GNG----------- 46
38|1qq4A|gi|231 117 QNFIQTDASINPGNSGGALVNLNGELIGINTASFNP-QGSMAGNI 160
9|1qq4A|gi|1561 122 -IQTDAAINNGNSGGPMFNLDQKVIGVNTAIFS--PL-------- 155
1svpA 95 -RFTIPRGVGGRGDAGRPIMDNSGRVVAIVLGG--AD-------- 128
9|1svpA|gi|4262 95 -RFTVPKGVGAKGDSGRPILDNQGRVVAIVLGG--AN-------- 128
65|1svpA|gi|191 94 -ILYSMRAAEASRGDSGRPFTDNSGKVVGIVLG--GG-------- 127
cons 181 . 225
14|1qq4A|gi|183 152 ---EDIEGIGFAIPINEVKTRLGSLSKPILKL-------GITAR- 185
23|1qq4A|gi|744 163 ---QEAVNLGFAIPINTVKKFLDTI---L--TQKKVEKAYLGVTV 199
1qq4A 170 CGIPASQRSSLFERLQPILSQYGLS---LVTG------------- 198
93|1svpA|gi|755 48 -----------IL-GNGAYVSAIVQ---G---------------- 61
71|1svpA|gi|928 47 -----------VVTRSGTYVSAIAQ---T-----------EKSI- 65
38|1qq4A|gi|231 161 -------GLGFAIPVNLARNIKDQL---I------------ANN- 182
9|1qq4A|gi|1561 156 ---GTNIGIGFAIPSNTAKPIIERL---KKDG----------KVS 184
1svpA 129 ---EGTRTALSVVTWNSKGKTIKTT---PEGT----------EEW 157
9|1svpA|gi|4262 129 ---EGSRTALSVVTWNERGVTVKYT---PENC----------EPW 157
65|1svpA|gi|191 128 ---PDGRRTRLSVIGFDKKLKAREI---AYSE----------AIP 156
cons 226 270
14|1qq4A|gi|183 186 -T------------- 186
23|1qq4A|gi|744 200 MT------------- 201
1qq4A 199 --------------- 198
93|1svpA|gi|755 62 --ERVEEPVPEAYNP 74
71|1svpA|gi|928 66 -EDNPE--------- 70
38|1qq4A|gi|231 183 -GVVRR--------- 187
9|1qq4A|gi|1561 185 R-------------- 185
1svpA 158 SA------------- 159
9|1svpA|gi|4262 158 S-------------- 158
65|1svpA|gi|191 157 WT------------- 158
cons 271 285