T-COFFEE, Version_5.72(Fri Jun 6 17:32:56 WEST 2008)
Cedric Notredame
CPU TIME:1 sec.
SCORE=24
*
BAD AVG GOOD
*
14|1qq4A|gi|183 : 29
1qq4A : 17
23|1qq4A|gi|744 : 28
65|1svpA|gi|191 : 20
1svpA : 22
9|1qq4A|gi|1561 : 29
9|1svpA|gi|4262 : 23
38|1qq4A|gi|231 : 28
71|1svpA|gi|928 : 24
93|1svpA|gi|755 : 19
cons : 24
14|1qq4A|gi|183 --------------QEGLGSGFIIN-EDGYVVTNYHVINGAQEVK
1qq4A -ANIVGGIEYSIN-------------NASLCSVGFSVTRGATKGF
23|1qq4A|gi|744 --FGELPPGFERQ-VASLGSGFIFD-PEGYILTNYHVVGGADNIT
65|1svpA|gi|191 SVKRARQSTFPVY-HDGAISGYAVL-IGSRVFKPAHVKGKFDHPE
1svpA -LKLEADRLFDVKNEDGDVIGHALA-MEGKVMKPLHVKGTIDHPV
9|1qq4A|gi|1561 ----QTPKSVPLG------SGFIIE-PNGLIVTNYHVIANVDKIN
9|1svpA|gi|4262 AMKLESDKTFPIR-LDGKINGYACV-VGGKLFRPLHVEGKIDNDI
38|1qq4A|gi|231 --------PQERI-NESLGSGVIIDAKNGYVLTNHHVIEGADEVS
71|1svpA|gi|928 ----------------------AVQTKPGLFKTN-----------
93|1svpA|gi|755 ----------------------NVQTKPGIFKTA-----------
cons .
14|1qq4A|gi|183 VIFSDGKEVNA------KVVNYDAER-----DIAVIKITDD-VKM
1qq4A VTAGHCGTVNATARIGGAVVGTFAARVFPGNDRAWVSLTSAQTLL
23|1qq4A|gi|744 VTMLDGSKYDA------EYIGGDEEL-----DIAVIKIKASDKKF
65|1svpA|gi|191 LADIK--------------FQVAEVM-----DLEAAAYPK-CMRD
1svpA LSKLK--------------FTKSSAY-----DMEFAQLPV-NMRS
9|1qq4A|gi|1561 IKLADNTELSA------KLIGNDTKT-----DLALLKIDS-EEPL
9|1svpA|gi|4262 LAALK--------------TKKASKY-----DLEYADVPQ-SMRS
38|1qq4A|gi|231 VTLADGRTVKA------DFIGSDPDT-----DVALMRIPAQ--NL
71|1svpA|gi|928 ---------------------------------------------
93|1svpA|gi|755 ---------------------------------------------
cons
14|1qq4A|gi|183 PGI------AQLGDSSTVKAGEEVIAIGNP-LGKEFSSTVTKGIV
1qq4A PRVANGSSFVTVRGSTEAAVGAAVCHSGRT-TGY-QCGTITAKNV
23|1qq4A|gi|744 PYL-------EFGDSDKVKIGEWAIAIGNP-LG--FQHTVTVGVV
65|1svpA|gi|191 QA--------AEPATMMDGVYNGEYG-NIQEWRT-IL--------
1svpA EAF-------TYTSEHPEGFYNWHHG-AVQ-YSG-GRFTIPRGV-
9|1qq4A|gi|1561 PFV-------EFGDSNDARVGDWVIAIGNP-FGN-LGGTVTSGII
9|1svpA|gi|4262 DTF-------KYTHEKPRGYYSWHHG-AVQ-YEN-GRFTVPKGV-
38|1qq4A|gi|231 SAI-------SLADSDALRVGDFVVAVGNP-FG--IGQTVTSGIV
71|1svpA|gi|928 --------------------------------------TGTIGAV
93|1svpA|gi|755 --------------------------------------HGEI---
cons
14|1qq4A|gi|183 SSPNRKMKTENGN--VLDYIQTDAAINPGNSGGPLINSKGEVIGI
1qq4A TAN-------YAEGAVRGLTQSNACMGRGDSGGSWITSAGQAQGV
23|1qq4A|gi|744 SATNRRIPKPDGSGYYVGLIQTDAAINPGNSGGPLLNIHGEVIGI
65|1svpA|gi|191 ------------------YSMRAAEASRGDSGRPFTDNSGKVVGI
1svpA -------------------------GGRGDAGRPIMDNSGRVVAI
9|1qq4A|gi|1561 SSKGRDIDIDTD-NIVDNFIQTDAAINNGNSGGPMFNLDQKVIGV
9|1svpA|gi|4262 -------------------------GAKGDSGRPILDNQGRVVAI
38|1qq4A|gi|231 SAVGRSGLRGLG---YQNFIQTDASINPGNSGGALVNLNGELIGI
71|1svpA|gi|928 S----------------------LDFSPGTSGSPIVDKKGKVVGL
93|1svpA|gi|755 -----------------GAVSL--DYPIGTSGSPIVNSNGEIIGL
cons * :* . . .:
14|1qq4A|gi|183 NTAKKVGEDI----EGIGFAIPINEVKTR---LGSLSK--PILK-
1qq4A MSGGNVQ--------SNGNNCGIPASQRSSL-FERLQPI---LSQ
23|1qq4A|gi|744 NTAIVNPQEA----VNLGFAIPINTVKKF---LDTILTQKKVEKA
65|1svpA|gi|191 VLGGGPD--------GRRTRLSVIGFDKKLKAREIAYSEAIPW--
1svpA VLGGADE--------GTRTALSVVTWNSKGKTIKTTPEGTEEW--
9|1qq4A|gi|1561 NTAIFSPLGTN---IGIGFAIPSNTAKPI---IERLKKDGKVS--
9|1svpA|gi|4262 VLGGANE--------GSRTALSVVTWNERGVTVKYTPENCEPW--
38|1qq4A|gi|231 NTASFNPQGSMAGNIGLGFAIPVNLARNI---KDQLIA-------
71|1svpA|gi|928 YGNGV-----VTRS-GTYVSAIAQTEKSI---EDNPE--------
93|1svpA|gi|755 YGNGV-----ILGN-GAYVSAIVQGERVE---EPVPEA-------
cons .
14|1qq4A|gi|183 -LGITAR-T
1qq4A Y-GLSLVTG
23|1qq4A|gi|744 YLGVTVM-T
65|1svpA|gi|191 --------T
1svpA ------S-A
9|1qq4A|gi|1561 --------R
9|1svpA|gi|4262 --------S
38|1qq4A|gi|231 -NNGVV-RR
71|1svpA|gi|928 ---------
93|1svpA|gi|755 -YNP-----
cons