2nd PROSITE Workshop,

27-29 June 2001



Wed 27
Time Title Speaker Location
8:45-9:00 Welcome Address Cedric Notredame (IGS-Marseille) Salle Conferences IBSM
9:00-9:30 Combining Structures and Sequences Within a Multiple Sequence Alignment Cedric Notredame (IGS-Marseille) Salle Conferences IBSM
9:30-10:00 Real: A new strategy for the design of functional signatures in protein sequences(abstract) Chantal Abergel (IGS-Marseille) Salle Conferences IBSM
10:00-10:30 A case study: updating SH2 Philip Bucher (SIB-Lausanne) Salle Conferences IBSM
10:30-11:00 Bacterial Genome Analysis Hiroyuki Ogata (IGS-Marseille) Salle Conferences IBSM
11:00-11:30 Classification des Zn fingers, situation dans PROSITE et problemes techniques pour les identifier. Nicolas Hulo (SIB-Geneve) Salle Conferences IBSM
11:45-13:15 Lunch: IGS Campus
13:30-14:30 Good profiles and what they are good for (abstract) Philipp Bucher (SIB-Lausanne) Salle Conferences GLM
14:30-15:30 La base ProDom de familles de domaines protéiques, au présent et au futur Daniel Kahn (INRA-Toulouse) Salle Conferences GLM
15:30-16:30 Utilisation et Developpement de Prosite dans le cadre de l'annotation automatique de proteomes microbiens Amos Bairoch (SIB-Geneve) Salle Conferences GLM
16:30-17:30 Beyond the limit of the traditional ("bourgeois") domain shuffling view: some alternative ("situationist") protein evolution models(abstract) Jean Michel Claverie (IGS-Marseille) Salle Conferences GLM

Thurs 28
Time Title Speaker Location
9:00-9:30 From QDOC to TIBS: a successful report Laurent Falquet (SIB-Lausanne) Salle Conferences IBSM
9:30-10:00 Definition of enzyme-specific profiles for metabolic pathway prediction Clothilde Renard (INRA-Toulouse) Salle Conferences IBSM
10:00-10:30 The elusive roles of bacterial glutathione S-transferases: new lessons from genomes Marco Pagni (SIB-Lausanne) Salle Conferences IBSM
11:00-11:30 Projects Introduction Salle Conferences IBSM
11:45-13:15 Lunch: CNRS Campus
14:00-18:00 Workshop

Linux Room: University

Friday 29
Time Title Speaker Location
9:00-12:00 Workshop

Linux room: University
11:45-13:15 Lunch: University Campus
14:00-18:00 Workshop: Summary and Discussions

Linux room: University

Saturday 30
Cruise to Friouls's Island,
Meeting at 9:00 am, Metro Station "le vieux Port", Fish Market Exit

Sunday 1
Visit of Marseille
Meeting at 9:00 am, Metro Station "le vieux Port", Fish Market Exit