Multipe Sequence Alignments Post-Processing:
Extracting Blocks, Selecting Sequences and Decreasing Redundancy

  1. Use seq_reformat in order to remove all the gapped positions form the following Multiple Sequence Alignment (*).
  2. Extract all the highly conserved regions and measure their average percent identity.
  3. Identify and extract the sequence that is on average the most similar to all the others.

Questions should be sent to C.Notredame